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fredag 11 maj 2018

WWP1 (Kr.8q21.39 , AIP5, Tiul1, hSDRP1, E3 ubikitiiniligaasi (HECT tyyppinen)

https://www.ncbi.nlm.nih.gov/gene/11059

Also known as
AIP5; Tiul1; hSDRP1
Summary WW domain-containing proteins are found in all eukaryotes and play an important role in the regulation of a wide variety of cellular functions such as protein degradation, transcription, and RNA splicing. This gene encodes a protein which contains 4 tandem WW domains and a HECT (homologous to the E6-associated protein carboxyl terminus) domain. The encoded protein belongs to a family of NEDD4-like proteins, which are E3 ubiquitin-ligase molecules and regulate key trafficking decisions, including targeting of proteins to proteosomes or lysosomes. Alternative splicing of this gene generates at least 6 transcript variants; however, the full length nature of these transcripts has not been defined. [provided by RefSeq, Jul 2008]
Expression Ubiquitous expression in liver (RPKM 24.3), gall bladder (RPKM 23.0) and 25 other tissues See more
 
Nimet:   Preferred Names

NEDD4-like E3 ubiquitin-protein ligase WWP1
Names
HECT-type E3 ubiquitin transferase WWP1
Nedd-4-like ubiquitin-protein ligase
TGIF-interacting ubiquitin ligase 1
WW domain-containing protein 1
atrophin-1 interacting protein 5

Konservoitunut domeeni ja peptidirakenne 

Conserved Domains (2) summary
cd04021
Location:17140
C2_E3_ubiquitin_ligase; C2 domain present in E3 ubiquitin ligase
COG5021
Location:307922
HUL4; Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones]

NEDD4-like E3 ubiquitin-protein ligase WWP1 [Homo sapiens]

NCBI Reference Sequence: NP_008944.1
LOCUS       NP_008944                922 aa            linear   PRI 01-APR-2018
DEFINITION  NEDD4-like E3 ubiquitin-protein ligase WWP1 [Homo sapiens].
ACCESSION   NP_008944 XP_005250816
VERSION     NP_008944.1
DBSOURCE    REFSEQ: accession NM_007013.3
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (residues 1 to 922)
  AUTHORS   Han Z, Sagum CA, Takizawa F, Ruthel G, Berry CT, Kong J, Sunyer JO,
            Freedman BD, Bedford MT, Sidhu SS, Sudol M and Harty RN.
  TITLE     Ubiquitin Ligase WWP1 Interacts with Ebola Virus VP40 To Regulate
            Egress
  JOURNAL   J. Virol. 91 (20), e00812-17 (2017)
   PUBMED   28768865
  REMARK    GeneRIF: study describes a physical and functional interaction
            between Ebola virus VP40 (eVP40) and WWP1, a host E3 ubiquitin
            ligase that ubiquitinates VP40 and regulates virus-like particles
            egress.
            Publication Status: Online-Only
REFERENCE   2  (residues 1 to 922)
  AUTHORS   French ME, Klosowiak JL, Aslanian A, Reed SI, Yates JR 3rd and
            Hunter T.
  TITLE     Mechanism of ubiquitin chain synthesis employed by a HECT domain
            ubiquitin ligase
  JOURNAL   J. Biol. Chem. 292 (25), 10398-10413 (2017)
   PUBMED   28461335
  REMARK    GeneRIF: results demonstrate that WWP1 catalyzes the formation of
            Ub chains through a sequential addition mechanism, in which Ub
            monomers are transferred in a successive fashion to the substrate,
            and that ubiquitination by WWP1 requires the presence of a
            low-affinity, noncovalent Ub-binding site within the HECT domain.
REFERENCE   3  (residues 1 to 922)
  AUTHORS   Chen Z, Jiang H, Xu W, Li X, Dempsey DR, Zhang X, Devreotes P,
            Wolberger C, Amzel LM, Gabelli SB and Cole PA.
  TITLE     A Tunable Brake for HECT Ubiquitin Ligases
  JOURNAL   Mol. Cell 66 (3), 345-357 (2017)
   PUBMED   28475870
  REMARK    GeneRIF: Describe an autoinhibitory mechanism for WWP1 ubiquitin
            ligase involving a linker-HECT domain interaction. This
            intramolecular interaction traps the HECT enzyme in its inactive
            state and can be relieved by linker phosphorylation.
REFERENCE   4  (residues 1 to 922)
  AUTHORS   Li Q, Li Z, Wei S, Wang W, Chen Z, Zhang L, Chen L, Li B, Sun G, Xu
            J, Li Q, Wang L, Xu Z, Xia Y, Zhang D, Xu H and Xu Z.
  TITLE     Overexpression of miR-584-5p inhibits proliferation and induces
            apoptosis by targeting WW domain-containing E3 ubiquitin protein
            ligase 1 in gastric cancer
  JOURNAL   J. Exp. Clin. Cancer Res. 36 (1), 59 (2017)
   PUBMED   28431583
  REMARK    GeneRIF: Results show that WWP1 is frequently upregulated in
            gastric cancer (GC) tissues and cells, and that its 3'-UTR is a
            putative target of miR-584 which suppresses its protein expression
            by mRNA degradation.
            Publication Status: Online-Only
REFERENCE   5  (residues 1 to 922)
  AUTHORS   Chen J, Shi H, Chen Y, Fan S, Liu D and Li C.
  TITLE     DNA damage induces expression of WWP1 to target DeltaNp63alpha to
            degradation
  JOURNAL   PLoS ONE 12 (4), e0176142 (2017)
   PUBMED   28426804
  REMARK    GeneRIF: Knock-down of WWP1 abrogates DNA damage-induced
            down-regulation of DeltaNp63alphaand partially rescues cell
            apoptosis
            Publication Status: Online-Only
REFERENCE   6  (residues 1 to 922)
  AUTHORS   Flasza M, Gorman P, Roylance R, Canfield AE and Baron M.
  TITLE     Alternative splicing determines the domain structure of WWP1, a
            Nedd4 family protein
  JOURNAL   Biochem. Biophys. Res. Commun. 290 (1), 431-437 (2002)
   PUBMED   11779188
REFERENCE   7  (residues 1 to 922)
  AUTHORS   Conkright MD, Wani MA and Lingrel JB.
  TITLE     Lung Kruppel-like factor contains an autoinhibitory domain that
            regulates its transcriptional activation by binding WWP1, an E3
            ubiquitin ligase
  JOURNAL   J. Biol. Chem. 276 (31), 29299-29306 (2001)
   PUBMED   11375995
REFERENCE   8  (residues 1 to 922)
  AUTHORS   Mosser EA, Kasanov JD, Forsberg EC, Kay BK, Ney PA and Bresnick EH.
  TITLE     Physical and functional interactions between the transactivation
            domain of the hematopoietic transcription factor NF-E2 and WW
            domains
  JOURNAL   Biochemistry 37 (39), 13686-13695 (1998)
   PUBMED   9753456
REFERENCE   9  (residues 1 to 922)
  AUTHORS   Wood JD, Yuan J, Margolis RL, Colomer V, Duan K, Kushi J, Kaminsky
            Z, Kleiderlein JJ, Sharp AH and Ross CA.
  TITLE     Atrophin-1, the DRPLA gene product, interacts with two families of
            WW domain-containing proteins
  JOURNAL   Mol. Cell. Neurosci. 11 (3), 149-160 (1998)
   PUBMED   9647693
REFERENCE   10 (residues 1 to 922)
  AUTHORS   Pirozzi G, McConnell SJ, Uveges AJ, Carter JM, Sparks AB, Kay BK
            and Fowlkes DM.
  TITLE     Identification of novel human WW domain-containing proteins by
            cloning of ligand targets
  JOURNAL   J. Biol. Chem. 272 (23), 14611-14616 (1997)
   PUBMED   9169421
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC036065.1, AY043361.1, BM664090.1 and AW137654.1.
            On Aug 31, 2013 this sequence version replaced XP_005250816.1.
            
            Summary: WW domain-containing proteins are found in all eukaryotes
            and play an important role in the regulation of a wide variety of
            cellular functions such as protein degradation, transcription, and
            RNA splicing. This gene encodes a protein which contains 4 tandem
            WW domains and a HECT (homologous to the E6-associated protein
            carboxyl terminus) domain. The encoded protein belongs to a family
            of NEDD4-like proteins, which are E3 ubiquitin-ligase molecules and
            regulate key trafficking decisions, including targeting of proteins
            to proteosomes or lysosomes. Alternative splicing of this gene
            generates at least 6 transcript variants; however, the full length
            nature of these transcripts has not been defined. [provided by
            RefSeq, Jul 2008].
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR1660803.42287.1,
                                           SRR1660803.74219.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA1965299, SAMEA1966682
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..922
                     /organism="Homo sapiens"
                     /db_xref="taxon:9606"
                     /chromosome="8"
                     /map="8q21.3"
     Protein         1..922
                     /product="NEDD4-like E3 ubiquitin-protein ligase WWP1"
                     /EC_number="2.3.2.26"
                     /note="Nedd-4-like ubiquitin-protein ligase; atrophin-1
                     interacting protein 5; TGIF-interacting ubiquitin ligase
                     1; WW domain-containing protein 1; HECT-type E3 ubiquitin
                     transferase WWP1"
                     /calculated_mol_wt=105071
     Region          17..140
                     /region_name="C2_E3_ubiquitin_ligase"
                     /note="C2 domain present in E3 ubiquitin ligase; cd04021"
                     /db_xref="CDD:175988"
     Region          <307 ..922="" cdd="" cddsrv.cgi="" db_xref="CDD:<a href=" https:="" note="Ubiquitin-protein ligase [Posttranslational
                     modification, protein turnover, chaperones]; COG5021" region_name="HUL4" tructure="" uid="227354" www.ncbi.nlm.nih.gov="">227354
" Site order(573,603,614,675,849,884..885,888..892,912,919) /site_type="active" /note="catalytic cleft [active]" /db_xref="CDD:238033" Site order(703,706..707,709..710,713,720,722,726..727,729,734, 739,756,760) /site_type="other" /note="E2 interaction site" /db_xref="CDD:238033" Site 890 /site_type="other" /experiment="experimental evidence, no additional details recorded" /note="Required for ubiquitin-thioester formation. {ECO:0000250}; propagated from UniProtKB/Swiss-Prot (Q9H0M0.1)" CDS 1..922 /gene="WWP1" /gene_synonym="AIP5; hSDRP1; Tiul1" /coded_by="NM_007013.3:281..3049" /db_xref="CCDS:CCDS6242.1" /db_xref="GeneID:11059" /db_xref="HGNC:HGNC:17004" /db_xref="MIM:602307" ORIGIN 1 matasprsdt snnhsgrlql qvtvssaklk rkknwfgtai ytevvvdgei tktaksssss 61 npkwdeqltv nvtpqttlef qvwshrtlka dallgkatid lkqallihnr klervkeqlk 121 lslenkngia qtgeltvvld glvieqenit ncsssptiei qengdalhen gepsarttar 181 lavegtngid nhvptstlvq nsccsyvvng dntpsspsqv aarpkntpap kplasepadd 241 tvngesssfa ptdnasvtgt pvvseenals pnctsttved ppvqeiltss ennecipsts 301 aelesearsi lepdtsnsrs ssafeaaksr qpdgcmdpvr qqsgnantet lpsgweqrkd 361 phgrtyyvdh ntrtttwerp qplppgwerr vddrrrvyyv dhntrtttwq rptmesvrnf 421 eqwqsqrnql qgamqqfnqr ylysasmlaa endpygplpp gwekrvdstd rvyfvnhntk 481 ttqwedprtq glqneeplpe gweirytreg vryfvdhntr tttfkdprng kssvtkggpq 541 iayergfrwk lahfrylcqs nalpshvkin vsrqtlfeds fqqimalkpy dlrrrlyvif 601 rgeegldygg larewfflls hevlnpmycl feyagknnyc lqinpastin pdhlsyfcfi 661 grfiamalfh gkfidtgfsl pfykrmlskk ltikdlesid tefynsliwi rdnnieecgl 721 emyfsvdmei lgkvtshdlk lggsnilvte enkdeyiglm tewrfsrgvq eqtkafldgf 781 nevvplqwlq yfdekelevm lcgmqevdla dwqrntvyrh ytrnskqiiw fwqfvketdn 841 evrmrllqfv tgtcrlplgg faelmgsngp qkfciekvgk dtwlprshtc fnrldlppyk 901 syeqlkekll faieetegfg qe // 

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