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måndag 26 februari 2024

Syöpätutkimuksista: Annexiinit, annexiini reseptorit, kalsiumin aineenvaihdunta ja p53 normaalissa rintakudoksessa ja rintasyövässä

 https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0169925

Annexin/S100A Protein Family Regulation through p14ARF-p53 Activation: A Role in Cell Survival and Predicting Treatment Outcomes in Breast Cancer

Discussion

Approximately two-thirds of all breast cancers harbor the wild type p53 protein. Contrary to a long-held belief that favorable chemotherapy outcome is dependent upon p53-mediated apoptosis [50], some reports suggest a less favorable outcome for p53wt breast cancers [4, 15]. Our previous studies have demonstrated that p53 induces a viable, metabolically active senescence-like cellular phenotype which supports the paradigm that p53 may be protective against apoptosis in breast cancer cells [16, 17]. This has been partly explained by the concept that p53 interacts with ER to protect cells against apoptosis, yet how p53 activity hinders chemotherapy response is not clear. In order to accurately predict clinical response, we need to understand the cellular changes occurring in response to activation of the p53 pathway. Regulating calcium signaling is essential for mammary gland function and deregulation of calcium homeostasis is associated with cancer pathophysiology. It has been difficult to determine how these calcium-dependent multi-faceted annexin proteins are regulated due to the sequence similarity of the annexin family of proteins and their compensatory functions within the cell. However, using SILAC LC-MS/MS methodology, we could identify unique peptides within the N-terminal region of the individual annexin proteins and show how p53 regulates the expression of members of this protein family. Our bioinformatic analysis of p53-induced upregulation of protein expression showed a strong association between ANXAs/S100A and either TP53 (p53) or CDKN1A (p21). This aligns with previous findings showing that p53 transcriptional regulation of p21 is a link to its pro-survival function and is opposed to the A5 induced cell death, reviewed in Clarke et al, 2015 [51]. These findings support a renewed study of p53 as a central regulator of normal cellular function and pathophysiology. This report is the first to demonstrate p14ARF-p53 as a key central orchestrator of the annexin/S100A family of calcium regulators in favor of pro-survival functions in the breast cancer cell, in contrast to the activation of the canonical annexin A5 pro-apoptotic response usually associated with this tumor suppressor function. In the two cell lines studied, the annexin A5 pro-apoptotic pathway was not activated by p14ARF-p53.

The annexins A1, A2, A4, A6 and A9, and annexin binding proteins S100A10, S100A11 and S100A13 were in the top 50 proteins upregulated by p14ARF/p53, as evidenced by SILAC-based analysis. Although the function(s) of each annexin is not clearly defined, annexin-Ca2+ regulation is unquestionably important in a wide range of both intra- and extracellular functions that require interaction with the acidic phospholipids of the intracellular compartment of all membranes and Ca2+ signaling [19].        (Loogista eikö olekin!?)

Annexins in normal physiology and breast cancer

The annexin A2/S100A10 complex, the abundance of which is increased by p53 activation, plays a role in membrane organization, membrane trafficking, in promoting ion conductance across membranes [19], and in calcium redistribution from bone to breast [5254]. Annexin A4 has recently been shown to be involved in plasma membrane remodeling, through regulation of the actin cytoskeleton, and in cellular cholesterol homeostasis [55]. The role of annexin A6 as a membrane organizer is further supported by a recent study [56]. These observations are consistent with the changes we have observed in the architectural reorganization of the cytoskeleton of MCF-7 cells post p14ARF/p53/p21 activation [17], suggesting annexin regulation via this pathway may be a normal cellular process in breast physiology.

Aberrant calcium signaling is often linked to each of the hallmarks of cancer cells [57]. In this report we highlight how differential changes in annexin and S100A expression may impact on signaling pathways and potentially lead to the activation or inhibition of downstream and/or compensatory cellular mechanisms, dependent upon the direction of expression change. Annexin and S100A deregulation has been associated with tumor invasion and metastasis, angiogenesis and drug resistance [20, 30, 31]. Loss of annexin A1 has been associated with malignant transformation in ER+ breast cancer [22], and, conversely, recent reports associate high annexin A1 expression with cellular invasion in ER- [27]. Increases in annexin A2 and S100A11 are associated with cell viability and increased invasiveness through their ability to maintain plasma membrane integrity [58] and promote epithelial-mesenchymal transition [29]. Dysregulation of individual annexin expression is associated with cancer development and treatment outcomes and it has been suggested that considering the expression of individual annexins may provide useful diagnostic and prognostic biomarkers [20]. Furthermore, modulation of calcium signaling has been demonstrated to change sensitivity of chemotherapeutic agents to apoptotic signals. This led to our further investigation of the impact of the differential regulation of annexin expression by p53 on patient treatment outcomes.

The ER-p53-annexin expression profile and treatment outcomes

To address how increases in the expression of individual annexins (A1, A2, A4, A6 and A9) and S100A binding partners (S100A10, S100A11 and S100A13), and combinations of thereof, could influence treatment outcomes, we performed a meta-analysis (biomarker assessment) based on 4142 breast cancer samples using the Kaplan-Meier plot database for breast cancer (available online) [38]. This is the first biomarker analysis directly comparing patient treatment outcomes using expression data of each individual annexin and then combining the expression date of all annexins and S100A binding proteins (i.e. an annexin expression profile) in a specific sub-set of breast cancer patients (ER+p53+) within a larger cohort. Overall, ER+ patient prognosis was more favorable when p53wt was present and was associated with increased RFS, DMSF and OS. The exception to this was upregulation of annexin A9 and S100A13, which were associated with poor RFS and RFS/OS respectively, and, interestingly, this was only in patients who had undergone endocrine treatments. The most favorable prognosis and survival odds were observed when all the upregulated annexins and S100A proteins were taken into account together as an expression profile or signature, and a comparison was made between ER+p53- patient tumors and ER+p53wt+ tumors. In general, all tumors responded more positively when p53wt was expressed independent of treatment regime. The most striking observation was that of ER+p53+ tumors with the expression profile of upregulated annexin A1, A2, A4, A6, A9 and S100A, A11 and A13, which showed great benefit from tamoxifen intervention alone, and, it was further shown, that additional treatment with chemotherapy would have no added beneficial effect. In conclusion, this study ascribes to p53wt the functions of a key organizer of calcium metabolism in breast cancer cells through the differential regulation of expression of the annexins, which are important calcium regulators. We have shown that p53 mediates pro-survival signalling in breast cancer cells and does not induce the canonical annexin A5 apoptotic pathway as previously thought. Although we, and others, have shown that reactivation of the canonical p14ARF-p53 pathway does not induce apoptosis in our studies, this does not necessarily relate to resistance to either chemotherapy or endocrine therapies. In our retrospective studies using a freely available breast cancer database, induction of p53 and overexpression of annexins associated with pro-survival functions is not associated with resistance to endocrine therapy. However, p53 induced overexpression of annexins, with consequent cellular phenotypic alterations appears to influence treatment outcomes in breast cancer. Importantly, prognosis/treatment outcome prediction is modified by whether one considers single genes individually or combines the gene expression profiles of various genes. Combining expression data of many genes is therefore the way forward to getting best /most accurate prognostic/treatment outcome information.

 

 

Löytyipä  anti VEGF vaikutuksen puolelta artikkelia annexiineista!

 https://www.biostock.se/2023/09/annexins-vd-var-overlagset-storsta-framgang-pa-lange/

 

Annexin-1, mitotic spindle.

https://www.biorxiv.org/content/10.1101/2021.07.28.454117v1 

 Annexin-2 depletion

https://www.researchgate.net/figure/In-control-cells-during-anaphase-the-central-spindle-is-in-close-proximity-with-the_fig1_284274579

Syöpätutkimuksesta: semaforiinit, plexiinit, neuropiliinit ja proliferaatiomerkitsijä Ki-67?

 Onpa monta vastausta,yli 6100.

 https://www.google.com/search?client=firefox-b-d&q=cancer+research%2C+semaphorins%2C+plexins+%2C+neuropilins+and+Ki-67

Toinen asia: Löytyykö uusia  syövänvastaisia  strategioita tai jopa täsmälääkkeitä  tämän assosiaatio-alueen  järjestelmistä?

Vuodelta 2016 Haifasta tutkimustuloksia  Semaforiinien osuudesta syövässä 

The role of the semaphorins in cancer

 Conclusions. Initially it was thought that the semaphorins would function primarily as inhibitors of tumor progression and tumor angiogenesis. This turned out not to be the case and by now several semaphorins have been found to promote tumor progression and to enhance angiogenesis. Furthermore, several semaphorins were reported both to induce and to inhibit tumor progression. These different activities seem context dependent and there is evidence suggesting that interactions between semaphorin receptors and apparently unrelated receptors such as various tyrosine-kinase receptors as well as post translational modifications of the semaphorins and their receptors can profoundly affect their biological activities as exemplified in the case of sema3E. These interactions and modifications can in turn profoundly affect the course of diseases such as cancer, and a better understanding of these interactions and post translational modifications is required if one considers the development of anti-tumorigenic and anti-angiogenic therapeutic agents that target or utilize semaphorin signal transduction. Thus, research aimed at a better understanding of the processing of semaphorins and their receptors and better characterization of the cross-talk between semaphorins and their receptors and other signal transduction systems is likely to be a focus of research for some time to come. In addition to cancer, it seems that semaphorins play major regulatory roles in the development and maintenance of the vascular and neuronal networks of organs such as the retina and the kidney, and it is likely that the study of the role of the semaphorins in the development of vascular diseases such as complications of diabetes such as diabetic retinopathy or diabetic nephropathy will also become a focus of intensive research in the near future.

  •  Otan  tämän artikkelin viitteistä sellaisen, jossa näkyy suomalainen tutkija vuonna 2003  selvittämässä  Sema 3A  kiderakennetta ja interaktiokohtia . Siinä vaiheessa havaittiin beta-propellirakenne.
  • Antipenko A, Himanen JP, van Leyen K, Nardi-Dei V, Lesniak J, Barton WA, Rajashankar KR, Lu M, Hoemme C, Puschel AW, and others. Structure of the semaphorin-3A receptor binding module. Neuron 2003; 39:589-98; PMID:12925274;   The semaphorins are a large group of extracellular proteins involved in a variety of processes during development, including neuronal migration and axon guidance. Their distinctive feature is a conserved 500 amino acid semaphorin domain, a ligand-receptor interaction module also present in plexins and scatter-factor receptors. We report the crystal structure of a secreted 65 kDa form of Semaphorin-3A (Sema3A), containing the full semaphorin domain. Unexpectedly, the semaphorin fold is a variation of the beta propeller topology. Analysis of the Sema3A structure and structure-based mutagenesis data identify the neuropilin binding site and suggest a potential plexin interaction site. Based on the structure, we present a model for the initiation of semaphorin signaling and discuss potential similarities with the signaling mechanisms of other beta propeller cell surface receptors, such as integrins and the LDL receptor.
  •  Vuodelta  2021  tutkimus semaforiinien ja plexiini- neuropiliini-reseptorin komplekseista elävän solun  solukalvosoissa:
  • 2021 Aug; 297(2): 100965. Published online 2021 Jul 13. doi: 10.1016/j.jbc.2021.100965
  • PMCID: PMC8350011 PMID: 34270956 Interactions between semaphorins and plexin–neuropilin receptor complexes in the membranes of live cells Shaun M. Christie,
  • Overall, the work here has investigated only a subset of the potential interactions within the plexin–neuropilin–semaphorin protein family. More receptors and ligand combinations will need to be analyzed to establish a more expansive and holistic understanding of how membrane protein–protein interactions regulate plexin–semaphorin signaling. Because of the large number of ligands and receptors (seven class 3 semaphorins, nine plexin receptors, and two neuropilins), this is a time- and resource-intensive undertaking. The work we presented here lays the groundwork for such a comprehensive study. PIE-FCCS is an ideal method for quantifying these interactions in a live cell environment. Combined with cell signaling and high-resolution structure studies, it will be possible to resolve the function role of receptor homodimerization and heterodimerization in this important signaling axis. This work will also reveal how dysregulated signaling by plexins and neuropilins influence disease states, which will enable new approaches for designing therapeutic strategies.

 https://www.tandfonline.com/doi/full/10.1080/19336918.2016.1197478

 

Tässä linkissä on selkeitä kaavakuvia  kyseessä olevista  moduleista.  


tässä yhteydessä  en vielä löytänyt näitten  signallointien ja Ki-67  indeksin  suoranaistq yhteyttä. ...

The expression levels of NRP-2 mRNA in the cells were detected by real-time fluorescence quantitative PCR. The expressions of proliferation-associated protein Ki-67 in the cells were detected by immunochemical staining  ... Effects of silencing neuropilin-2 on proliferation, migration, and invasion of colorectal cancer HT-29

  • Claudin-low  breast cancer:

https://breast-cancer-research.biomedcentral.com/articles/10.1186/s13058-022-01501-7

Claudins: The Newly Emerging Targets in Breast Cancer

 Finally, we show that NRP1 acts as a central hub for the aberrant activation of the RAS-MAPK pathway via EGFR and PDGFR activation to drive aggressive tumor progression, a hallmark of all claudin-low subgroups. These data identify NRP1 as a key driver of the claudin-low phenotype and support further testing of NRP1 inhibitors for improved control of claudin-low tumor progression.

  • Haku: claudin low tumors, Ki-67 index? 

For claudin 3, 4, 7 and E-cadherin a score of ≤4 was considered 'low' expression. For Ki67 a minimum of 100 tumor nuclei were counted per core and the tumor was considered Ki67 'low' if the percentage of positively stained nuclei was <14% and Ki67 'high' is the percentage of positively stained nuclei was ≥14% [12, 24].

söndag 25 februari 2024

Rintasyövän tyypeistä: lobulaarinen, duktaalinen, luminaalinen?

 https://pubmed.ncbi.nlm.nih.gov/26451490/

. 2015 Oct 8;163(2):506-19.
doi: 10.1016/j.cell.2015.09.033.  Comprehensive Molecular Portraits of Invasive Lobular Breast Cancer

Invasive lobular carcinoma (ILC) is the second most prevalent histologic subtype of invasive breast cancer. Here, we comprehensively profiled 817 breast tumors, including 127 ILC, 490 ductal (IDC), and 88 mixed IDC/ILC.

 Besides E-cadherin loss, the best known ILC genetic hallmark, we identified mutations targeting PTEN, TBX3, and FOXA1 as ILC enriched features. PTEN loss associated with increased AKT phosphorylation, which was highest in ILC among all breast cancer subtypes. Spatially clustered FOXA1 mutations correlated with increased FOXA1 expression and activity.

 Conversely, GATA3 mutations and high expression characterized luminal A IDC, suggesting differential modulation of ER activity in ILC and IDC. 

Proliferation and immune-related signatures determined three ILC transcriptional subtypes associated with survival differences. Mixed IDC/ILC cases were molecularly classified as ILC-like and IDC-like revealing no true hybrid features. This multidimensional molecular atlas sheds new light on the genetic bases of ILC and provides potential clinical options.

  • Invasive lobular carcinoma (ILC) is a clinically and molecularly distinct disease
  • ILCs show CDH1 and PTEN loss, AKT activation, and mutations in TBX3 and FOXA1
  • Proliferation and immune-related gene expression signatures define 3 ILC subtypes
  • Genetic features classify mixed tumors into lobular-like and ductal-like subgroups

 

fredag 23 februari 2024

Göteborgilaisia abstrakteja syöpätutkimusalalta

 https://gupea.ub.gu.se/handle/2077/59802

 

 

Validation cohorts

External validation was performed using two different publicly available breast cancer datasets profiled with the Affymetrix Human Genome U133 Set. The GSE1456 dataset consisted of 159 breast tumors, of which 128 had complete information for molecular subtype and histologic grade (18). Survival data were available for DSS, OS, and recurrence-free survival (RFS; time from surgical lesion removal to detection of tumor recurrence). The second dataset (GSE4922) comprised 249 tumors (Uppsala cohort), of which 237 tumors had complete information for age, ER status, tumor size, axillary lymph node status, and histologic grade (19). For this dataset, survival data were available for disease-free survival (DFS), which was defined as time from initial diagnosis to first relapse or breast cancer–related death. Of the 18 identified prognostic genes, 11 genes (ACAA1, ADGRG6, BORCS6, CCNA2, CDKN2A, HJURP, HSPA14, KIAA0494, NEIL3, STAM, and TRIP13) were found on the U133A Affymetrix chip and seven genes (CDCA5, FAM91A1, LRRCC1, MTURN, PRR11, SKA2, and SNX8) were found on U133B Affymetrix chip. To validate all 18 markers, the U133A and U133B sets were first normalized separately, and then, the log2-transformed values for both sets were merged for each cohort.

The third dataset [The Cancer Genome Atlas (TCGA) Breast Invasive Carcinoma dataset; ref. 20] consisted of mRNA sequencing (mRNA-seq) data for 900 primary breast tumors, of which 720 tumors had clinical information for the number of positive axillary lymph nodes, tumor size, age, ER, and PR status. Survival time was given as OS. The clinical characteristics of the validation cohorts stratified by the linear predictor can be found in Supplementary Table S1.

 Geenien nimet: 
 
ADGRG6, https://www.genecards.org/cgi-bin/carddisp.pl gene=ADGRG6&keywords=ADGRG6. Adhesion G protein- coupled receptor G6.
 
 
 
CDKN2A,  https://www.genecards.org/cgi-bin/carddisp.pl?gene=CDKN2A&keywords=CDKN2A . Cyclin dependent kinase inhibitor 2A. 

Holliday junction recognition protein. Enables histone binding activity and identical protein binding activity. Involved in several processes, including CENP-A containing chromatin assembly; regulation of DNA binding activity; and regulation of protein-containing complex assembly. Located in kinetochore; mitochondrion; and nuclear lumen.
 
HSPA14 . https://www.genecards.org/cgi-bin/carddisp.pl?gene=HSPA14&keywords=HSPA14 . Heat shock protein family  A (HSP-70) member 14. Predicted to enable several functions, including ATP binding activity; misfolded protein binding activity; and unfolded protein binding activity. Predicted to be involved in several processes, including cellular response to unfolded protein; chaperone cofactor-dependent protein refolding; and protein refolding. Located in cytosol. Colocalizes with ribosome.
 
 EFCAB14 Alias  KIAA0494 .  
https://www.genecards.org/cgi-bin/carddisp.pl?gene=EFCAB14&keywords=KIAA0494                     EF-Hand Calcium Binding Domain 14. Predicted to enable calcium ion binding activity. Predicted to be integral component of membrane.
 
NEIL3 , (ZGRF3, Zinc finger GRF-type 3), DNA glycosylase/AP lyase Neil3, Endonuclease VIII-like 3. https://www.genecards.org/cgi-bin/carddisp.pl?gene=NEIL3&keywords=NEIL3  
NEIL3 belongs to a class of DNA glycosylases homologous to the bacterial Fpg/Nei family. These glycosylases initiate the first step in base excision repair by cleaving bases damaged by reactive oxygen species and introducing a DNA strand break via the associated lyase reaction (Bandaru et al., 2002 [PubMed 12509226]).[supplied by OMIM, Mar 2008]
 
Signal Transducing Adaptor Molecule (SH3 Domain And ITAM Motif) 1.  Involved in intracellular signal transduction mediated by cytokines and growth factors. Upon IL-2 and GM-CSL stimulation, it plays a role in signaling leading to DNA synthesis and MYC induction. May also play a role in T-cell development. Involved in down-regulation of receptor tyrosine kinase via multivesicular body (MVBs) when complexed with HGS (ESCRT-0 complex). The ESCRT-0 complex binds ubiquitin and acts as sorting machinery that recognizes ubiquitinated receptors and transfers them to further sequential lysosomal sorting/trafficking processes. ( STAM1_HUMAN,Q92783 ) (Microbial infection) Plays an important role in Dengue virus entry. 
 
Thyroid Hormone Receptor Interactor 13. Human Papillomavirus Type 16 E1 Protein-Binding Protein.
 
Cell Division Cycle-Associated Protein 5 . Sororin.  Predicted to enable chromatin binding activity. Involved in double-strand break repair; mitotic sister chromatid segregation; and regulation of cell cycle process. Located in nucleoplasm.Regulator of sister chromatid cohesion in mitosis stabilizing cohesin complex association with chromatin. May antagonize the action of WAPL which stimulates cohesin dissociation from chromatin. Cohesion ensures that chromosome partitioning is accurate in both meiotic and mitotic cells and plays an important role in DNA repair. Required for efficient DNA double-stranded break repair.
 
Family With Sequence Similarity 91 Member A1. Involved in intracellular protein transport and vesicle tethering to Golgi. Located in cytoplasmic vesicle and trans-Golgi network.As component of the WDR11 complex acts together with TBC1D23 to facilitate the golgin-mediated capture of vesicles generated using AP-1. Diseases associated with FAM91A1 include Gastric Cardia Carcinoma and Pontocerebellar Hypoplasia. Among its related pathways are Signaling by Rho GTPases and RHOH GTPase cycle
 
 Leucine Rich Repeat And Coiled-Coil Centrosomal Protein 1. This gene encodes a centrosomal protein that maintains the structural integrity of the centrosome and plays a key role in mitotic spindle formation. The encoded protein contains an N-terminal leucine-rich repeat domain and a C-terminal coiled-coil domain. It associates with the centrosome throughout the cell cycle and accumulates on the mitotic centrosome. Required for the organization of the mitotic spindle. Maintains the structural integrity of centrosomes during mitosis.
 
Maturin Neural Progenitor Differentiation Regulator Protein,Involved in negative regulation of NF-kappaB transcription factor activity; positive regulation of MAPK cascade; and positive regulation of megakaryocyte differentiation. Located in cytoplasm.. Diseases associated with MTURN include Polycystic Kidney Disease 2 With Or Without Polycystic Liver Disease. Promotes megakaryocyte differentiation by enhancing ERK and JNK signaling as well as up-regulating RUNX1 and FLI1 expression (PubMed:24681962). Represses NF-kappa-B transcriptional activity by inhibiting phosphorylation of RELA at 'Ser-536' (PubMed:24681962). May be involved in early neuronal development (By similarity).
 
 Proline-Rich Protein 11. Transcription Repressor Of MHCII. Involved in regulation of cell cycle. Located in cytoplasm and nucleus.  Broad expression in bone marrow (RPKM 3.3), lymph node (RPKM 2.7) and 20 other tissues PRR11 (Proline Rich 11) is a Protein Coding gene. Diseases associated with PRR11 include Klatskin's Tumor.
Ubiquitinated (Probable).
Rapidly degraded by the proteasome; degradation may involve FBXW7-specific phosphorylated phosphodegron motifs.https://pubmed.ncbi.nlm.nih.gov/36727626/
 
 Spindle And Kinetochore Associated Complex Subunit 2 .Component of the SKA1 complex, a microtubule-binding subcomplex of the outer kinetochore that is essential for proper chromosome segregation (PubMed:17093495, 19289083, 23085020). Required for timely anaphase onset during mitosis, when chromosomes undergo bipolar attachment on spindle microtubules leading to silencing of the spindle checkpoint (PubMed:17093495). The SKA1 complex is a direct component of the kinetochore-microtubule interface and directly associates with microtubules as oligomeric assemblies (PubMed:19289083). The complex facilitates the processive movement of microspheres along a microtubule in a depolymerization-coupled manner (PubMed:17093495, 19289083). In the complex, it is required for SKA1 localization (PubMed:19289083). Affinity for microtubules is synergistically enhanced in the presence of the ndc-80 complex and may allow the ndc-80 complex to track depolymerizing microtubules (PubMed:23085020). ( SKA2_HUMAN,Q8WVK7 )


 Enables identical protein binding activity and phosphatidylinositol binding activity. Involved in early endosome to Golgi transport and intracellular protein transport. Located in early endosome membrane. Colocalizes with retromer complex. [provided by Alliance of Genome Resources, Apr 2022]
SNX8 (Sorting Nexin 8) is a Protein Coding gene. Diseases associated with SNX8 include Atrial Tachyarrhythmia With Short Pr Interval and Tetralogy Of Fallot. Gene Ontology (GO) annotations related to this gene include identical protein binding and phosphatidylinositol binding. An important paralog of this gene is SNX30. May be involved in several stages of intracellular trafficking. May play a role in intracellular protein transport from early endosomes to the trans-Golgi network

söndag 18 februari 2024

Assosioaatiota rinnan kyhmyjen ja kilpirauhasen kyhmyjen ym kesken.


. 2014;127(12):2286-92.
 https://pubmed.ncbi.nlm.nih.gov/24931243/

Epidemiological characteristics of thyroid nodules and risk factors for malignant nodules: a retrospective study from 6,304 surgical cases

Affiliations
  • PMID: 24931243
Abstract

Background: The prevalence of thyroid nodules (TN) is increasing rapidly. This study analyzed the epidemiological and clinical characteristics of TN in surgically treated patients and identified the risk factors for malignant nodules (MN) to provide more understanding of the differential diagnosis of TN.

Methods: A total of 6 304 TN cases who underwent thyroid surgery were included in this retrospective study. The clinical data were collected to evaluate the clinical and epidemiological characteristics and related risk factors for MN. The nature of TN (benign nodules (BN) or MN), medical records, laboratory data, and imaging data were analyzed. The risk factors for MN were screened using Spearman's rank correlation analysis and nonconditional binary Logistic regression analysis.

Results: The number of surgically treated TN cases increased yearly. A total of 34.33% of cases were MN and 65.67% were BN. Up to 56.74% of these cases underwent unnecessary surgery. Among the MN cases, papillary thyroid carcinoma accounted for 94%, in which 46.71% coexisted with benign thyroid disease and 32.28% with multiple foci. Single-related factor analysis showed that age, employment, disease duration, history of breast nodules and/or hypertension, the levels of serum thyroid-stimulating hormone (TSH), thyroglobulin antibody (TgAb), and thyroid peroxidase antibody (TPoAb), and ultrasound features of TN were related to MN. Stepwise nonconditional binary Logistic regression analysis showed that 13 factors may be the independent risk factors for MN, including <40 years old, previous history of breast nodules and/or hypertension, disease duration <1 month, employment, hypoechoic nodule, irregular nodules, nodule calcification, solid echo nodule, fuzzy boundary, rich blood flow within nodules, abnormal lymph nodes around the neck, nodule diameter <1 cm, and abnormally high TgAb.

Conclusions: Our results demonstrate a rapid increase in surgically treated TN cases and ratio of MN and indicate unnecessary surgeries in some cases. This study also suggest that age, duration of thyroid disease, history of breast disease and/or hypertension, the levels of serum TSH, TgAb, and TPoAb, and ultrasound features of TN are related to MN, and some of these factors may be the risk factors for MN.

Kilpirauhasfunktio ja jodipitoinen röntgenvarjoaine (ICM) tietokonetutkimuksessa

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5058927/ 

Iodine is an essential substrate for thyroid hormone production. The recommended daily intake of iodine is 150 μg. Excessive ingestion of or exposure to iodine is well-tolerated by the human body because of its intrinsic autoregulatory mechanisms. However, susceptible individuals, such as patients with known thyroid diseases, may fail to adapt to the iodine overload, resulting in hypo- or hyperthyroidism., The major sources of excess iodine in clinical practice are iodinated contrast medium (ICM), amiodarone, and povidone-iodine. ICM is widely used in imaging procedures, including cardiac catheterization and computed tomography (CT). A usual ICM dose for CT contains approximately 13,500 μg of free iodide and 15 to 60 g of bound iodine, several thousand times higher than the recommended daily intake dose., Bolus loading of these iodine-rich substances may induce transient or prolonged thyroid dysfunction even in patients without known thyroid disease. Although the use of modern diagnostic modalities with contrast has increased substantially, large nationwide studies with long-term follow-up to investigate the risk of thyroid disorder development after ICM exposure are lacking.

Hyper- and hypothyroidism increase the risk of cardiovascular diseases and associated mortality. Although the incidence rate (IR) of ICM exposure-related thyroid disorder is low, ICM is frequently used in modern diagnostic modalities and thus its occurrence becomes an important issue.

Taiwan is an iodine-sufficient area. For the present study, we aimed to determine the association between ICM exposure during CT and the subsequent development of thyroid disorders in patients without known thyroid disease by using the Taiwan National Health Insurance Research Database (NHIRD).

 

 

https://pubmed.ncbi.nlm.nih.gov/35928388/

torsdag 15 februari 2024

Tällainenkin ajatus tänään. Voiko olla herediteettiä jodiallergialle? Miten ehkäistä jodipitoisen kontrastiaineen (ICM) aiheuttamaa reaktiota?

  • Tämä muistuu sillon tällöin mieleen, kun isäni sanoi olevansa jodille allerginen ja sai jodipitoisista aineista aina  kovan yskänärsytyksen. Hänen yksi  hederitäärinen tautinsa oli B12-puute, johon tarvitsi B12 injektioita, joita juuri hänen sairastumisensa aikaan oli keksitty maailmassa, ettei tarvinnut syödä raakaa maksaa. 
  • Mikä voisi ehkäistä  jodipitoisten  kontrastiaineiden aiheuttamaa allergiaa/anafylaksiaa?  tästä löydän pari lääkeainetta , joista  voisi olla hyötyä: prednison ja terbutaliini ( Bricanyl). Erilaiset antihistamiinit eivät ole olleet  avuksi.  Reaktiossa on tyypillistä keuhko-ödemapiirteet varsinkin pulmonaarisesa hypertensiossa.
  • Löytyy jotain hereditääristä tekijää jodiherkkyyksissä.  Entä hereditäärisen  B12 puuteen jonkin syysn genetiikan assosiaatio tähän?
. 2020 May;55(5):304-309.
doi: 10.1097/RLI.0000000000000644.

HLA-DRB1*15: 02 Is Associated With Iodinated Contrast Media-Related Anaphylaxis

Affiliations

Abstract

Background: The incidence of severe reaction induced by iodinated contrast media (ICM) has increased over the years with an increasing use of imaging modalities. Although ICM anaphylaxis is rare, it can be life-threatening, but currently, there is no biomarker that can identify individuals at risk of ICM anaphylaxis.

Objective: The aim of this study is to investigate the genetic susceptibility of ICM anaphylaxis.

Methods: Patients who had ICM anaphylaxis were enrolled in the study, and their blood samples were collected for genotyping of human leukocyte antigen (HLA)-A, -B, -C, and -DR. The results were compared with those of healthy Korean general population. MRGPRX2 gene in ICM anaphylaxis group was also sequenced and compared with the Korean standard database of genetic polymorphism.

Results: The frequencies of 3 HLA alleles (B*52:01, C*12:02, and DRB1*15:02) were significantly higher in 47 patients with ICM anaphylaxis. In particular, HLA-DRB1*15:02 was 5 times more frequent in the ICM anaphylaxis group than the Korean general population (34.0% vs 6.6%; odds ratio, 7.306; 95% confidence interval, 3.622-14.740), and this difference was most pronounced in subjects with iohexol-induced anaphylaxis (odds ratio, 16.516; 95% CI, 5.241-52.047; P < 0.0001). Eight single nucleotide polymorphisms were identified in MRGPRX2 gene, but their frequencies were not different in those with ICM anaphylaxis compared with the general Korean population.

Conclusions: HLA-DRB1*15:02 is associated with ICM anaphylaxis in the Korean population.

https://pubmed.ncbi.nlm.nih.gov/6783164/

jodipitoiset varjoaineet radiodiagnostiikassa, miksi?

 

4 results

  
DNA breaks induced by iodine-containing contrast medium in radiodiagnostics: a problem of tungsten?
Ferlazzo ML, Devic C, Granzotto A, Charvet AM, Pilleul F, Colin C, Biston MC, Joubert A, Bourguignon M, Foray N. Eur Radiol Exp. 2018 Aug 15;2:21. doi: 10.1186/s41747-018-0050-9. eCollection 2018 Dec. PMID: 30148253 Free PMC article.
Iodine-containing contrast media (ICM) are extensively used to improve image quality and information content in x-ray-based examinations, particularly in computed tomography (CT). ...Why has iodine been preferred to any other heavy elements to e … Why has iodine been preferred to any other heavy elements to enhance contrast in radiodiagnostics? How to understand such DNA breaks effect? We searched for the answers in the early times of x-ray medical use. It appeared that the maximal ratio between the relative iodine and water mass energy absorption coefficients is reached in the range of 40-60 keV, which defines the energy range in which the dose is preferentially absorbed by ICM. This range does not correspond to the K-edge of iodine but to that of tungsten, the major component of the x-ray tube anode of CT scanners. At such energy, radiolysis of the ICM produces sodium or potassium iodide that prevents a normal DNA breaks repair and influences the individual response to x-ray low-dose. Both contrast enhancement and DNA breaks effect may therefore be caused by tungsten of the anodes of x-ray
Oral CT Contrast Agents: What's New and Why, From the AJR Special Series on Contrast Media.
Heimer MM, Sun Y, Bonitatibus PJ, Yeh BM. AJR Am J Roentgenol. 2023 Oct 25. doi: 10.2214/AJR.23.29970. Online ahead of print. PMID: 37877595 Review.
Current CT oral contrast agents improve the conspicuity and confidence for bowel and peritoneal findings in many clinical scenarios, particularly for outpatient and oncologic abdominopelvic imaging. Yet, existing positive and neutral oral contrast agents may diminish the detectability of certain radiologic findings, frequently in the same scans in which the oral contrast agent improves the detectability of other findings. With ongoing improvements in CT technology, particularly multi-energy CT, opportunities are opening for new types of oral contrast agents to further improve anatomic delineation and disease detection using CT. The CT signal of new dark oral contrast agents and of new high-Z oral contrast agents promise to combine the strengths of both positive and neutral oral CT contrast agents by providing distinct CT appearances in comparison with bodily tissues, iodinated IV contrast agents, and other classes of new CT contrast agents. High-Z oral contrast agents will unlock previously inaccessible capabilities of multi-energy CT, particularly photon-counting detector CT, for differentiating simultaneously administered IV and oral contrast agents; this technique will allow generation of rich 3D, intuitive, perfectly co-registered, high-resolution image sets with individual contrast-agent "colors" that provide compelling clarity for intertwined intraabdominal anatomy and disease processes.
Separating High-Z Oral Contrast From Intravascular Iodine Contrast in an Animal Model Using Dual-Layer Spectral CT.
Soesbe TC, Lewis MA, Nasr K, Ananthakrishnan L, Lenkinski RE. Acad Radiol. 2019 Sep;26(9):1237-1244. doi: 10.1016/j.acra.2018.09.012. Epub 2018 Oct 9. PMID: 30314734
RESULTS: The iodine and barium contrast appeared only in the iodine equivalent images and could not be differentiated from each other. However, the tantalum, tungsten, and rhenium contrast only appeared in the water equivalent images. This allowed i
Delays in imaging diagnosis of acute abdominal pain in the emergency setting.
Fruauff A, Trepanier C, Shaish H, Luk L. Clin Imaging. 2022 Oct;90:32-38. doi: 10.1016/j.clinimag.2022.06.015. Epub 2022 Jun 29. PMID: 35914341 Review.
There are many cases of abdominal pain in the ED with delayed diagnosis and management secondary to a combination of institutional policies and knowledge deficits in current imaging guidelines. Inappropriate use of abdominal radiographs, use of oral contrast for CT … 
 
 
. 2023 Jul 1;58(7):515-522.
doi: 10.1097/RLI.0000000000000978. Epub 2023 Apr 11.

New Contrast Media for K-Edge Imaging With Photon-Counting Detector CT

Affiliations
Free PMC article 
The recent technological developments in photon-counting detector computed tomography (PCD-CT) and the introduction of the first commercially available clinical PCD-CT unit open up new exciting opportunities for contrast media research. With PCD-CT, the efficacy of available iodine-based contrast media improves, allowing for a reduction of iodine dosage or, on the other hand, an improvement of image quality in low contrast indications. Virtual monoenergetic image reconstructions are routinely available and enable the virtual monoenergetic image energy to be adapted to the diagnostic task.

Mitä aineita käytetään avuksi tietokonetomo (TT) tutkimuksissa?

DUODECIM lehti

 https://www.duodecimlehti.fi/duo15551

DOCRATES, Syöpäsairaala 

/ https://www.docrates.com/syovan-hoito/kuvantaminen-ja-diagnoosi/tietokonetomografia-tt/

TT

Mitä TT-tutkimuksessa tapahtuu?

TT-kuvauksen aikana potilas makaa tutkimuspöydällä, joka liikkuu kuvauslaitteen sisälle ja läpi. TT-laitteen sisällä olevassa pyörivässä osassa on muun muassa röntgenputki, joka lähettää tutkimuksessa käytettävää röntgensäteilyä ja vastakkaisella puolella ilmaisin, joka mittaa potilaan läpi tullutta säteilyä. Kuvausosan täyteen pyörähdykseen kuluvaa aikaa voidaan säädellä kuvaustilanteen mukaan ja sen kesto voi olla n. 0,25 – 4 sekuntia. Kun potilaan läpi tullutta röntgensäteilyä mitataan pyörähdyksen aikana monesta suunnasta, voidaan tietojen perusteella laskea leikekuva, joka näyttää kudosten säteilyä vaimentavat ominaisuudet ns. Hounsfieldin lukuina (HU). Ilma esitetään TT-kuvissa yleensä mustana (HU=-1000), vesi keskiharmaana (HU=0) ja luu tai metalli kirkkaana (HU > 1000). Kuvassa voi olla yli 65000 harmaasävyä, joten yksityiskohtia voidaan nähdä sekä kirkkailla että tummilla alueilla.

Yleensä kuvauspöytä liikkuu samanaikaisesti, kun säteilyä tuotetaan ja läpäisyä mitataan. Tätä kutsutaan spiraalikuvaukseksi. Spiraalikuvaus on yleisin tapa suorittaa TT-kuvaus. Spiraalikuvaus on erityisen nopea kuvaustapa. Toinen mahdollisuus on kuvata leikkeet niin, että pöytä ei liiku säteilyn tuoton ja mittaamisen aikana. Kun putki ja ilmaisin ovat kiertäneet täyden ympyrän, siirretään pöytää ja tehdään uusi kuvaus uudesta kohdasta.

Tietokonetomografialaite tuottaa ensisijaisesti poikkileikkeen suuntaisia kuvia, mutta tutkimuksessa kerätyn runsaan informaation perusteella voidaan laskea leikekuvat missä tahansa suunnissa. Myös leikkeiden paksuutta voidaan muuttaa kuvauksen jälkeen. Kuvista voidaan laskea tarvittaessa 3-ulotteisia malleja.

Tietokonetomografiatutkimus on nopea tutkimus, yksi kuvasarja kestää noin kymmenestä sekunnista minuuttiin. Koko vartalo saadaan kuvatuksi hengityspidätyksen aikana. TT-tutkimus voi sisältää yhden tai useamman asettelukuvauksen ja yleensä 1-3 varsinaista kuvasarjaa. Yleensä tutkimuksen valmisteluihin kuluu enemmän aikaa kuin varsinaiseen kuvantamiseen.


Tutkimuksen suorittaminen

Useimmissa tietokonetomografiatutkimuksissa käytetään jodipohjaista varjoainetta. Varjoaine vaimentaa säteilyä tehokkaasti ja muuttaa kudosten välistä kontrastia niin, että tutkittava kohde erottuu paremmin. Ennen varjoainetutkimusta pitää selvittää munuaisten toiminta ja mahdollinen varjoaineallergia. Mikäli munuaisten kyky puhdistaa verta on merkittävästi heikentynyt, voidaan TT-tutkimus tehdä vain ilman varjoainetta.

Varjoaine annetaan yleensä laskimonsisäisesti automaattisen varjoaineruiskun avulla. Varjoaineruiskutuksen ajoitus suhteessa TT-kuvauksen alkuun riippuu tehtävästä tutkimuksesta. Yleensä varjoaine annetaan joitain kymmeniä sekunteja ennen TT-kuvantamisen aloitusta, mutta aika voi vaihdella muutamista sekunneista useisiin minuutteihin. Joissain tutkimuksissa varjoaine annetaan juotavassa muodossa, jolloin se menee verisuonten sijaan mahalaukkuun ja suolistoon.

 https://pubmed.ncbi.nlm.nih.gov/?term=%22Contrast+Media%22+in+CT+diagnostics+of+Ca+mammae