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onsdag 28 mars 2018

TRIM2 (Kr. 4q31.3) , TRIM-NHL, CMT2, neuroprotektiivinen, neurofilamentin NEFL aineenvaihdunta


TRIM2, NHL-TRIM2 , CMT2R, RNF86 (Kr. 4q31.3)

Tämä TRIM2 geeni koodaa proteiinia, jossa on RBCC motiivi (RING, B-Box, Coiled coil) . Lisäksi se omaa filamiinidomeenin ja 6 NHL-toistojaksoa . Proteiinissa on 744 aminohappoa. NHL- toistoja ksot C-terminaalissaan omaavia TRIM-jäseniä ovat TRIM2, -3, -32 ja -71).
TRIM2 sijaitse sytoplasmisissa filamenteissa ja on aksonissa neuroprotektiivinen, toimii E3-ligaasina kohdeproteiineilleen. (UBE2D1 riippuvainen E3-ubikitiiniligaasi, joka välittää NEFL:n, kevytketjusen neurofilamentin ja fosforyloidun Bcl2L11 ubikitinaatiota. (Kts. Kuva neuronista) Saattaa osallistua neuronin nopean iskemiavasteen toleranssiin. Mutaatiot voivat johtaa aksonaaliseen neuropatiaan, koksa neurofilamenttai alkaa kertyä ilman TRIM2 normaalifunktiota (Charciot Marie Tooth 2.
Proteiinihomeostaasissa TRIM2 säätyy mikroRNA miRNA-9 ja miRNA186 avulla alas. Nämä mikroRNA:ta säätävät alas myös TGFB1, SIRT1, BTBD3). AD ja AMD- taudeissa taas säätää juuri nämä mikroRNA:t alas.
Geenistä pleissautuu useita variantteja. On todettu että TRIM2 geeni kuuluu myös niihin TRIM-geeneihin, jotka ovat restriktiivisiä endogeenisia retroviruksia kohtaan.
  • The protein encoded by this gene is a member of the tripartite motif (TRIM) family. The TRIM motif includes three zinc-binding domains, a RING, a B-box type 1 and a B-box type 2, and a coiled-coil region. The protein localizes to cytoplasmic filaments. It plays a neuroprotective role and functions as an E3-ubiquitin ligase in proteasome-mediated degradation of target proteins. Mutations in this gene can cause early-onset axonal neuropathy. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Nov 2014] Broad expression in brain (RPKM 37.2), thyroid (RPKM 33.2) and 18 other
Kuva neuronista: TRIM2 kohdemolekyyli, jonka se ubikitinoi, on NEFL , kevytketjuinen neurofilamentti aksonissa.
https://ars.els-cdn.com/content/image/1-s2.0-S0959437X16301435-gr1.jpg

PubMed artikkeleita:

2. Differential expression of tripartite motif-containing family in normal human dermal fibroblasts in response to porcine endogenous retrovirus infection. Kimsa MW, et al. Folia Biol (Praha), 2014. PMID 25056437 Antiretroviral restriction factors may play an essential role in the safety of xenotransplantation. Therefore, the present study focused on investigation of the changes in the tripartite motif-containing family (TRIM) gene expression in normal human dermal fibroblasts with and without lipopolysaccharide stimulation in response to porcine endogenous retrovirus infection. Analysis of the expression profile of TRIMs was performed using oligonucleotide microarrays and QRT-PCR. Nine (TRIM1, TRIM2, TRIM5, TRIM14, TRIM16, TRIM18, TRIM22, TRIM27 and TRIM31) statistically significantly differentially expressed genes were found (P < 0.05, one-way ANOVA). In conclusion, comprehensive analysis of retroviral restriction factor gene expression in human dermal fibroblasts before and after porcine endogenous retrovirus infection with and without LPS stimulation may suggest association of the selected TRIMs with antiretroviral activity.
3. Expressioodular architecture that includes N-terminal RING finger and B-box domains, a middle coiled-coil domain and a C-terminal NHL domain. To characterize the functional role of its NHL domain …n, purification, crystallization and preliminary X-ray diffraction analysis of the C-terminal NHL domain of human TRIM2. Guan X, et al. Acta Crystallogr F Struct Biol Commun, 2014 May. PMID 24817735, Free PMC Article The tripartite motif-containing protein 2 (TRIM2) functions as an E3 ubiquitin ligase. Loss of function of TRIM2 has been shown to result in early-onset axonal neuropathy. As a member of the TRIM-NHL family of proteins, TRIM2 has a conserved modular architecture that includes N-terminal RING finger and B-box domains, a middle coiled-coil domain and a C-terminal NHL domain. To characterize the functional role of its NHL domain …

4. Deficiency of the E3 ubiquitin ligase TRIM2 in early-onset axonal neuropathy. Ylikallio E, et al. Hum Mol Genet, 2013 Aug 1. PMID 23562820
Inherited peripheral neuropathies are a heterogeneous group of disorders that can affect patients of all ages. Children with inherited neuropathy often develop severe disability, but the genetic causes of recessive early-onset axonal neuropathies are not fully known. We have taken a whole-exome sequencing approach to identify causative disease mutations in single patients with early-onset axonal neuropathy. Here, we report compound heterozygous mutations in the tripartite motif containing 2 (TRIM2) gene in a patient with childhood-onset axonal neuropathy, low weight and small muscle mass. We show that the patient fibroblasts are practically devoid of TRIM2, through mRNA and protein instability caused by the mutations. TRIM2 is an E3 ubiquitin ligase that ubiquitinates neurofilament light chain, a component of the intermediate filament in axons. Resembling the findings in our patient's sural nerve biopsy, Trim2-gene trap mice showed axonopathy with accumulations of neurofilaments inside axons. Our results suggest that loss-of-function mutations in TRIM2 are a cause of axonal neuropathy,which we propose to develop as a consequence of axonal accumulation of neurofilaments, secondary to lack of its ubiquitination by TRIM2. Hum Mol Genet. 2013 Aug 1;22(15):2975-83. doi: 10.1093/hmg/ddt149. Epub 2013 Apr 



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