Leta i den här bloggen


måndag 28 oktober 2019

KLHDC7B (22q13.33) (Koko: 1235 aa peptidi( Polyglutamiinijaksoja, runsas proliinipitoisuus , atrofiini-1 domeeni

https://www.ncbi.nlm.nih.gov/gene/113730  ( Tämä Kelch-proteiini  voi  vaikuttaa  CREB:iin ,  transkriptionaalisen koaktivaattoriin  sitoutuvan   CBP:n   (creb binding protein) pois vatäytymisstä tumasta atrofiini-1  domeenin kautta ja se taas aiheuttaa että glukoneogeneesi  voi päästä alkamaan. Luulisi että  tuumorissa sellainen olisi edullista  syövän  energia-aineenvaihdunnalle.  Neuronedegeneratiivisissa taudeissa POLYGLUTAMIINITAUDEISSA, on tätä mekanimsia atrofiini-1 domeenista.
Preferred Names
kelch domain-containing protein 7B
  1. NM_138433.5NP_612442.3  kelch domain-containing protein 7B
  2. ORIGIN      
            1 miqgtlepdg plwgwdwdsd ndwdsavlal lalavvaata lalhwfgsgh dqeaaepvst
           61 algaqphqag gaelalqpks kvsdgsegqs pgqgkpeppg rgqqspvpaa apggglaama
          121 rlplktavee arrealgqqr gsatpaapra egkepprpgt allgrseagg msapllihft
          181 prspgseaea etggvrassr qaagpagqqd tgpwqagagp sgsmgrgrgr rrrmdagsgd
          241 rarrprkldp lrlgaagsvw davdgaaald aharglptgp plaqepalpa lpapralqpg
          301 sqtegsgakg gwsreasgvp apgggwpwvs revpgtrsfg papdstrpwl esppqgrpls
          361 sqgpgatgay dageagadss rdnspaadlg ptrppeqakp aaaghsraps rsreprprsa
          421 sppaapgpgf ppealtlpsp sdflplevtq dpsvgenlra apapssasaq vltsapasvl
          481 apalasspss aptsattsts sptsapapap tsaptstpap apspaaaatp apapvpvptl
          541 tppspaltpv ptpalspapt paltpaaspa ltpvptpals paptpaptpa aspapaptsa
          601 ptptpaaspa padgskpqes valprryqeg qvsaswgnli amvlrshpfp rqdrpqgsvp
          661 ravpgspvgp ststhsedrh gpsssvgtvi gtgtgglvea ggqpqprsse tngspspdpp
          721 pglrgegtre ksldplpqaa mprgpaqppa qrppgpaass sarrsqpvpq lrkrsrceia
          781 psseqevrpa asgdpqgeap geggspagrs galtekqeea rklmvflqrp ggwgvvegpr
          841 kpssralepa taaalrrrld lgscldvlaf aqqhgepgla qetyalmsdn llrvlgdpcl
          901 yrrlsaadre rilslrtgrg ravlgvlvlp slyqggrsgl prgprgeepp aaapvslplp
          961 ahlhvfnpre ntwrpltqvp eeaplrgcgl ctmhnylfla ggirgsgaka vcsnevfcyn
         1021 pltniwsqvr pmqqaraqlk lvaldgllya iggeclysme cydprtdawt praplpagtf
         1081 pvaheavacr gdiyvtgghl fyrllryspv kdawdecpys ashrrssdiv alggflyrfd
         1141 llrgvgaavm ryntvtgsws raaslplpap aplhcttlgn tiyclnpqvt atftvsggta
         1201 qfqakelqpf plgstgvlsp filtlppedr lqtsl
    //


    Conserved Domains (3) summary
    sd00038
    Location:9861032
    Kelch; KELCH repeat [structural motif]
    cl26464
    Location:52421
    Atrophin-1; Atrophin-1 family
    Atrophin-1 family
    Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteristic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
    cl28614
    Location:9661138
    BTB; Broad-Complex, Tramtrack and Bric a brac

Inga kommentarer:

Skicka en kommentar