Leta i den här bloggen


måndag 20 maj 2019

UBOX1, U-boxin omaava E4 ubikitiiniligaasi (16p13.3) ,E4 ubikitiiniligaasi"

Kertaan  E3 ubikitiiniligaasien alaryhmiä.  tämä onkin erikoinen  ubikitiiniligaasi. tätä on sanottu jopa E4 ubikitiiniligaasiksi, koska se järjestää  ja koordinoi,  E1- ubikitiinin aktivoijan, E2- siirtäjän - ja E3 ubikitiiniligaasin, jotta polyubikitiiniä voi siirtää kohdeproteiineille.

 Dimerisoitumismekanismi poikkeaa  yleensä symmetrisestä homodimerisoitumissta  asymmetrisyytensä  takia.  Tämän geenin mutaatio assoioituu spinocerebellaariseen ataxiaan ja  multisysteemineurodegeneraatioon.   Geeni  ilmenee rasvakudoksessa  ja munuaisessa   eniten.

E4 U-BOX ubikitiiniligaaseja , jotkä  koordinoivat  E1, E2 ja E3  entsyymejä polyubikitiinin käsitelyssä on ainakin seuraavat.
1)   UBOX1 STUB1, CHIP; SCAR, HSPABP2, NY-CO-7, SDCCAGT
(2) E4A, UBOX2 , UFD2
(3) E4B, UBOX3, HDNB1, UFD2A

(16p13.3) STUB1, UBOX1

STIP1 homology and U-box containing protein 1 [ Homo sapiens (human) ]

Gene ID: 10273, updated on 23-Apr-2019
Also known as
CHIP; SCA48; UBOX1; SCAR16; HSPABP2; NY-CO-7; SDCCAG7
Summary
This gene encodes a protein containing tetratricopeptide repeat and a U-box that functions as a ubiquitin ligase/cochaperone. The encoded protein binds to and ubiquitinates shock cognate 71 kDa protein (Hspa8) and DNA polymerase beta (Polb), among other targets. Mutations in this gene cause spinocerebellar ataxia, autosomal recessive 16. Alternative splicing results in multiple transcript variants. There is a pseudogene for this gene on chromosome 2. [provided by RefSeq, Jun 2014]
Expression
Ubiquitous expression in fat (RPKM 42.9), kidney (RPKM 39.1) and 25 other tissues See more
Orthologs
mouse all

Preferred Names
E3 ubiquitin-protein ligase CHIP
Names
CLL-associated antigen KW-8
RING-type E3 ubiquitin transferase CHIP
STIP1 homology and U-box containing protein 1, E3 ubiquitin protein ligase
antigen NY-CO-7
carboxy terminus of Hsp70-interacting protein
heat shock protein A binding protein 2 (c-terminal)
serologically defined colon cancer antigen 7
Conserved Domains (3) summary
sd00006
Location:21 → 51
TPR; TPR repeat [structural motif]
pfam12895
Location:3 → 48
ANAPC3; Anaphase-promoting complex, cyclosome, subunit 3
cd16654
Location:155 → 221
RING-Ubox_CHIP; U-box domain, a modified RING finger, found in carboxyl terminus of HSP70-interacting protein (CHIP) and similar proteins

Related articles in PubMed

  1. Symmetry breaking during homodimeric assembly activates an E3 ubiquitin ligase. Ye Z, et al. Sci Rep, 2017 May 11. PMID 28496195, Free PMC Article C-terminus of Hsc/p70-Interacting Protein (CHIP) is a homodimeric E3 ubiquitin ligase. Each CHIP monomer consists of a tetratricopeptide-repeat (TPR), helix-turn-helix (HH), and U-box domain. In contrast to nearly all homodimeric proteins, CHIP is asymmetric. To uncover the origins of asymmetry, we performed molecular dynamics simulations of dimer assembly. We determined that a CHIP monomer is most stable when the HH domain has an extended helix that supports intra-monomer TPR-U-box interaction, blocking the E2-binding surface of the U-box. We also discovered that monomers first dimerize symmetrically through their HH domains, which then triggers U-box dimerization. This brings the extended helices into close proximity, including a repulsive stretch of positively charged residues. Unable to smoothly unwind, this conflict bends the helices until the helix of one protomer breaks to relieve the repulsion. The abrupt snapping of the helix forces the C-terminal residues of the other protomer to disrupt that protomer's TPR-U-box tight binding interface, swiftly exposing and activating one of the E2 binding sites. Mutagenesis and biochemical experiments confirm that C-terminal residues are necessary both to maintain CHIP stability and function. This novel mechanism indicates how a ubiquitin ligase maintains an inactive monomeric form that rapidly activates only after asymmetric assembly.
  2. CHIP Knockdown Reduced Heat Shock Response and Protein Quality Control Capacity in Lens Epithelial Cells. Zhang W, et al. Curr Mol Med, 2015. PMID 26321754
     Protein quality control (PQC) systems, including molecular chaperones and ubiquitin-proteasome pathway (UPP), plays an important role in maintaining intracellular protein homeostasis. Carboxyl terminus of Hsc70- interacting protein (CHIP) links the chaperone and UPPs, thus contributing to the repair or removal of damaged proteins. Over-expression of CHIP had previously been used to protect cells from environmental stress.
  3. Regulation of autophagic flux by CHIP. Guo D, et al. Neurosci Bull, 2015 Aug. PMID 26219223, Free PMC Article

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?


Muistiin 20.5. 2019


Inga kommentarer:

Skicka en kommentar