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måndag 27 april 2020

ZBTB7A (19p13.3), ZBTB7, ZNF857A, FBI-1, FBI-1, TIP21, pokemon

https://www.ncbi.nlm.nih.gov/pubmed/31385585/
Official Symbol
ZBTB7A
Official Full Name
zinc finger and BTB domain containing 7A
Also known as
LRF; FBI1; FBI-1; TIP21; ZBTB7; ZNF857A; pokemon
Expression
Ubiquitous expression in colon (RPKM 8.0), stomach (RPKM 5.5) and 25 other tissues See more
Orthologs mouse all
Preferred Names
zinc finger and BTB domain-containing protein 7A
Names
HIV-1 1st-binding protein 1
HIV-1 inducer of short transcripts binding protein
POK erythroid myeloid ontogenic factor
POZ and Krueppel erythroid myeloid ontogenic factor
TTF-I-interacting peptide 21
factor binding IST protein 1
factor that binds to inducer of short transcripts protein 1
leukemia/lymphoma-related factor, ( LRF)
lymphoma related factor
pokemon 1
zinc finger and BTB domain containing 7A, HIV-1 inducer of short transcripts binding protein
zinc finger protein 857A
  NP_001304919.1  zinc finger and BTB domain-containing protein 7A
ORIGIN      
        1 maggvdgpig ipfpdhssdi lsglneqrtq gllcdvvilv egrefpthrs vlaacsqyfk
       61 klftsgavvd qqnvyeidfv saealtalmd faytatltvs tanvgdilsa arlleipavs
      121 hvcadlldrq ilaadagada gqldlvdqid qrnllrakey leffqsnpmn slppaaaaaa
      181 asfpwsafga sdddldatke avaaavaava agdcngldfy gpgppaerpp tgdgdegdsn
      241 pglwperded aptgglfppp vappaatqng hygrggeeea aslseaapep gdspgflsga
      301 aegedgdgpd vdglaastll qqmmssvgra gaaagdsdee sraddkgvmd yylkyfsgah
      361 dgdvypawsq kvekkiraka fqkcpicekv iqgagklprh irthtgekpy ecnickvrft
      421 rqdklkvhmr khtgekpylc qqcgaafahn ydlknhmrvh tglrpyqcds ccktfvrsdh
      481 lhrhlkkdgc ngvpsrrgrk prvrggapdp spgatatpga paqpsspdar rngqekhfkd
      541 edededvasp dglgrlnvag aggggdsggg pgaatdgnft agla
 
Description
Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1 and 2 encode the same protein.
Conserved Domains (3) summary
sd00017
Location:412432
ZF_C2H2; C2H2 Zn finger [structural motif]
pfam00651
Location:24131
BTB; BTB/POZ domain
pfam13465
Location:425449
zf-H2C2_2; Zinc-finger double domain

What's a GeneRIF?
Protein Gene Interaction Pubs
Tat tat Binding of FBI-1 to HIV-1 Tat is mediated by the zinc finger (ZF) domain of FBI-1 (amino acids 377-584) and is diminished by point mutations in Tat at amino acids 18, 30, and 31 PubMed

tat FBI-1 is a cellular POZ-domain-containing protein that binds to the HIV-1 LTR and Tat protein and specifically stimulates Tat activity
 

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