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måndag 28 oktober 2019

KBTBD4 (11p11.2), BKLHD4, FLJ10450, HSPC252. mutarotataasiperheen domeeni, virulenssifaktori?

 https://www.ncbi.nlm.nih.gov/gene/55709#gene-expression
 
Official Symbol
KBTBD4
kelch repeat and BTB domain containing 4
Also known as
BKLHD4; HSPC252
Expression
Ubiquitous expression in testis (RPKM 10.3), thyroid (RPKM 10.1) and 25 other tissues See more
Orthologs

mRNA and Protein(s)

  1. NM_001318716.1NP_001305645.1  kelch repeat and BTB domain-containing protein 4 isoform c
     
    ORIGIN      
            1 mglpvprpgg gwtqvlgrsh resferagkc ggssseesky swqreklasm espeepgasm
           61 denyfvnytf kdrshsgrva qgimklclee elfadvtisv egrefqlhrl vlsaqscffr
          121 smftsnlkea hnrvivlqdv sesvfqllvd yiyhgtvklr aeelqeiyev sdmyqltslf
          181 eecsrflart vqvgnclqvm wladrhsdpe lytaakhcak thlaqlqnte eflhlphrll
          241 tdiisdgvpc sqnpteaiea winfnkeere afaeslrtsl keigenvhiy ligkessrth
          301 slavslhcae ddsisvsgqn slchqitaac khggdlyvvg gsiprrmwkc nnatvdwewc
          361 aplprdrlqh tlvsvpgkda iyslggktlq dtlsnaviyy rvgdnvwtet tqlevavsga
          421 aganlngiiy llggeendld fftkpsrliq cfdtetdkch vkpyvlpfag rmhaavhkdl
          481 vfivaegdsl vcynplldsf trlclpeaws sapslwkias cngsiyvfrd rykkgdanty
          541 kldpatsavt vtrgikvllt nlqfvla
    //
     
    Conserved Domains (6) summary
    smart00225
    Location:95189
    BTB; Broad-Complex, Tramtrack and Bric a brac
    cd14733
    Location:191249
    BACK_like; BTB-And-C-terminal-Kelch (BACK) domain and similar domains
    TIGR03548
    Location:403560
    mutarot_permut; cyclically-permuted mutarotase family proteinMembers of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.
    sd00038
    Location:328363
    Kelch; KELCH repeat [structural motif]
    pfam00651
    Location:88187
    BTB; BTB/POZ domain
    pfam07646
    Location:327363
    Kelch_2; Kelch motif
 
 
 
 (Yleistä seulontaa)
 
 

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